System and method for retrieving and using gene expression data from multiple sources
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United States of America Patent
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Issued Date -
Jan 9, 2003
app pub date -
Mar 14, 2002
filing date -
Mar 14, 2001
priority date (Note) -
Abandoned
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Abstract
A method of analyzing gene expression, gene annotation, and sample information in a relational format supporting efficient exploration and analysis, the method comprising: providing a data warehouse which comprises a gene expression database for storing quantitative gene expression measurements for tissues and cell lines screened using various assays; a clinical database for storing information on bio-samples and donors; and a fragment index for biological properties for DNA fragments; providing a connector which permits loading of more than one source of gene expression, gene annotation, and sample information, receiving a query regarding gene expression of one or more DNA fragments; determining the level of gene expression of the one or more DNA fragments; correlating the level of gene expression with the clinical database and the fragment index; and displaying the results of said correlation is disclosed.
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