DATA COMPRESSION SYSTEM FOR DNA SEQUENCE
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United States of America Patent
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Oct 24, 2013
app pub date -
Dec 27, 2011
filing date -
Jan 7, 2011
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Abstract
The present invention discloses a data compression system for DNA sequence, which is a lossless compression system for DNA sequence data, based on the MA-ARV codebook, which is able to search the approximate repeat fragment of the MA-ARV code vector in the whole sequence, and use a heuristic optimization algorithm of memetic algorithm to optimize the construction process of the compressed codebook, so as to fully use the repeat nature of DNA sequence data, and eliminate the redundancy effectively.
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