Genomic Landscapes of Human Breast and Colorectal Cancers

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United States of America Patent

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14451861

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Human cancer is caused by the accumulation of mutations in oncogenes and tumor suppressor genes. To catalogue the genetic changes that occur during tumorigenesis, we isolated DNA from 11 breast and 11 colorectal tumors and determined the sequences of the genes in the Reference Sequence database in these samples. Based on analysis of exons representing 20,857 transcripts from 18,191 genes, we conclude that the genomic landscapes of breast and colorectal cancers are composed of a handful of commonly mutated gene “mountains” and a much larger number of gene “hills” that are mutated at low frequency. We describe statistical and bioinformatic tools that may help identify mutations with a role in tumorigenesis. These results have implications for understanding the nature and heterogeneity of human cancers and for using personal genomics for tumor diagnosis and therapy.

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UNIV JOHNS HOPKINS3400 NORTH CHARLES STREET BALTIMORE MARYLAND 21218 US

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Inventor(s)

Inventor Name Address # of filed Patents Total Citations
BARBER, Thomas Nobelsville, US 27 195
JONES, Sian Baltimore, US 25 88
KINZLER, Kenneth W Baltimore, US 282 4776
LIN, Jimmy Cheng-Ho Baltimore, US 13 73
PARMIGIANI, Giovanni Baltimore, US 14 101
PARSONS, D Williams Bellaire, US 18 78
SJOBLOM, Tobias Uppsala, SE 8 17
VELCULESCU, Victor Dayton, US 54 617
VOGELSTEIN, Bert Baltimore, US 324 6303
WOOD, Laura D Baltimore, US 8 11

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