VARIANT-CALLING ON DATA FROM AMPLICON-BASED SEQUENCING METHODS

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United States of America Patent

SERIAL NO

14847608

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Abstract

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The invention provides systems and methods for calling variants in data from amplicon-based sequencing methods by aligning and assembling reads, associating the reads with their source amplicons, treating each amplicon as a separate sample or file, calling variants on the reads. A portion of each read is aligned to the primer binding site of the associated amplicons. Variants called at sites in the mapped portions of each read are discarded. The remaining variant calls are merged, to provide a set of variant calls across the original target region.

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Patent Owner(s)

Patent OwnerAddress
SEVEN BRIDGES GENOMICS INC1 MAIN STREET SUITE 500 CAMBRIDGE MA 02142

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Inventor(s)

Inventor Name Address # of filed Patents Total Citations
Popovic, Milos Belgrade, RS 63 1051
Rakocevik, Goran Belgrade, RS 1 0

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